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Department of Internal Medicine, University of Texas Southwestern Medical Center, Dallas, Texas
Submitted 16 May 2005 ; accepted in final form 19 December 2005
| ABSTRACT |
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, -2
, and -3
during postnatal lung growth in immature and mature (2.5 and 12 mo old, respectively) dogs and during compensatory lung growth 3 wk and 10 mo after right PNX. Relative to their respective controls, HIF-1
transcript was 5295% higher in immature lungs and 284% higher in the remaining lung 3 wk post-PNX. HIF-2
transcript did not change during maturation but was 42% lower 3 wk post-PNX. HIF-3
transcript was 5365% lower in both the immature lung and 3 wk post-PNX. Changes were no longer detectable 10 mo post-PNX. No change in HIF transcripts was observed in kidney and liver post-PNX. Consistent with the mRNA changes, HIF-1
protein was 120 and 196% higher in growing lungs and 3 wk post-PNX relative to their respective controls. Overexpression of HIF-1
in cultured HEK-293 cells increased endogenous expression of EPO-R protein. These results demonstrate regulated expression of the HIF system and parallel changes in HIF-1
and EPO-R expression during two types of lung growth. Because the normal growing lung is not hypoxic, the HIF system likely responds to other signals encountered during sustained lung strain. hypoxia-inducible factors; pneumonectomy; postnatal development; lung growth; ribonucleic acid blot; real-time polymerase chain reaction; immunoblot
HIF is a heterodimer composed of
- and
-subunits. The
-subunit, also known as aryl hydrocarbon receptor nuclear translocator (ARNT), is constitutively expressed independently of oxygen availability. The
-subunit is stabilized by hypoxia, which allows the HIF dimer to interact with transcriptional coactivator proteins (20). HIF-1
is expressed widely in a hypoxia-dependent manner in the bronchial epithelium, bronchial smooth muscle cells, and alveolar epithelium (39). HIF-2
and HIF-3
are two other members of the basic-loop-helix (bHLH) PER/ARNT/SIM (PAS) domain protein superfamily. HIF-2
, also known as endothelial PAS domain protein-1 or HIF-1
-like factor, exhibits hypoxic stabilization and ARNT binding similar to HIF-1
(9) and is expressed predominantly in pneumocytes and in pulmonary vascular endothelial cells (8, 9). HIF-3
is similar to HIF-1
and HIF-2
in the bHLH and PAS domains but lacks the COOH-terminal transactivation domain (14).
Other than oxygen tension, nitric oxide, growth factors, and mechanical strain can modulate HIF-1
expression and function (6, 7); these same factors are also involved in regulating lung growth. Silencing HIF-1
mRNA retards lung cell proliferation in vitro (13). Targeted gene knockout of HIF-1
(22) and HIF-2
(8) results in embryonic lethality or neonatal respiratory distress. In addition, alveolar hypoxia enhances postnatal lung development in dogs (23) and compensatory lung growth in post-PNX rats (32), indirectly suggesting that hypoxia regulatory pathways may also mediate lung growth. Expression of HIF-2
correlates with that of vascular endothelial growth factor (VEGF) and VEGF receptors in newborn rat lungs during normal development or hyperoxic injury (17). The level of HIF-3
mRNA increases with moderate hypoxia (15) and may oppose the action of HIF-1
(14). However, the expression pattern of HIF-1
, -2
, and -3
in vivo during lung growth and maturation has not been established.
We hypothesized that the elevated autocrine/paracrine EPO-R expression during lung growth (10) is accompanied by upregulation of its upstream transcriptional regulators HIF-1
, -2
, and -3
. We measured the mRNA levels of HIF-1
, -2
, and -3
by RNA blot and real-time RT-PCR in the lungs of growing (immature, 2.5-mo old) and mature (12 mo old) dogs and in dogs that underwent right PNX or sham PNX at 2.5 mo of age and followed for 3 wk or 10 mo. We demonstrated that HIF-1
mRNA and protein expression is higher in the actively growing lungs of young animals than in mature lungs and that these changes are further accentuated during post-PNX compensatory lung growth. In separate in vitro experiments, we overexpressed human HIF-1
in HEK-293 cells and measured EPO-R protein in these cells after transfection to directly demonstrate the linkage between HIF transactivation and EPO-R gene expression.
| MATERIALS AND METHODS |
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3.5 and 12 mo of age, respectively, animals were deeply anesthetized with intravenous pentobarbital sodium and mechanically ventilated. Via a left thoracotomy, the left upper lobe was removed. Post-PNX tissue samples were taken from the peripheral and central regions of the lobe, rinsed with saline, flash-frozen in liquid nitrogen, and stored at 70°C for later analysis.
cDNA cloning and sequencing.
Initial fragments of canine dog HIF-1
, -2
, and -3
cDNA were amplified by conventional RT-PCR. The primers were based on published human sequences for HIF-1
(GenBank accession no. NM_001530) and HIF-2
(BC051338
[GenBank]
), respectively, and primers for HIF-3
were based on a rat sequence (NM_022528
[GenBank]
; Table 1). The PCR fragments were cloned into pGEM-T Easy Vector (Promega, Madison, WI); after sequence verification, the inserts were excised and used as probes in RNA blot analysis.
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, HIF-2
, and HIF-3
were generated by the Rediprime II random prime labeling system (Amersham Biosciences, Piscataway, NJ). Nylon membranes were incubated in Quick-Hyb (Stratagene, La Jolla, CA) containing [32P]cDNA probe (>109 counts·min1·µg cDNA1) at 68°C for 2 h. The blots were washed in 2x saline-sodium citrate (SSC, 1x saline-sodium citrate is 0.15 M NaCl and 0.015 M sodium citrate, pH 7.0) and 0.1% SDS three times for 15 min each at room temperature, two times in 0.2x SSC for 10 min at 68°C, and subjected to autoradiography, and signals were quantified by densitometry. For control of loading, the membranes were stripped and rehybridized with a mouse 18S rRNA probe. Because of the very weak signal intensity, the RNA blot for HIF-3
was not quantified.
Quantitative real-time RT-PCR.
Real-time RT-PCR was performed for HIF-1
, -2
, and -3
using the respective primers shown in Table 1. The primers for HIFs were based on partial dog cDNA sequences cloned in this study, and the for the reference gene cyclophilin A primers were based on a published dog sequence (AF243140
[GenBank]
; see Ref. 16). These primers were designed using Primer Express (Applied BioSystems, Foster City, CA), and manufactured by Integrated DNA Technologies (Coralville, IA). The cDNA was generated from 200 ng DNase I-treated total RNA in a 20-µl reaction using a Taqman Reverse Transcription Kit (Applied BioSystems). Amplification was carried out using an ABI Prism 7000 Sequence Detector (Applied BioSystems), with one cycle of 95°C for 10 min followed by 40 cycles of 95°C for 15 s and 60°C for 1 min. The reaction was performed in triplicate for each sample. Each reaction had a final volume of 20 µl, containing 1x SYBR Green Universal PCR Master Mix, 200 nM each of forward primer and reverse primers, and 5 ng cDNA. Pooled cDNA from four normal adult dog lungs was used as a calibration standard for different runs.
Analysis of RNA blot and PCR data. For RNA blot, three to four replicate assays were prepared; each replicate used a separate tissue sample obtained from a different location of the lobe to compare immature with mature (n = 6/group) or sham with PNX (n = 4/group) animals. The autoradiographic intensity of target mRNA bands was normalized to that of the corresponding 18S rRNA and then expressed as a ratio of the mean signal intensity of the respective control group (mature or sham) obtained on the same blot. The normalized ratios from replicate assays in each animal were averaged.
For real-time PCR, at least three replicate assays were performed; each replicate used a separate RNA sample from each lung (immature and mature, n = 6/group; sham and 3 wk post-PNX, n = 6/group; and sham and 10 mo post-PNX, n = 5/group). The relative quantity of mRNA with respect to the standard was calculated using standard equations (Applied BioSystems):
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CT = mean threshold cycle(CT; HIF) mean CT(cyclophilin), and 
CT =
CT(sample)
CT(standard). Individual results were expressed as a ratio to the mean value in the respective control group (mature or sham); replicate results from each animal were averaged and then compared among groups by one-way ANOVA (3 wk post-PNX vs. sham and pre-PNX, 10 mo post-PNX vs. sham) or unpaired t-test (immature vs. mature). Differences were considered significant at P < 0.05.
Cell culture and in vitro transfection.
To explore whether there is a link between HIF-1
upregulation and increased EPO-R expression, we cultured human embryonic kidney (HEK)-293 cells in 5% CO2 and 95% air at 37°C in DMEM (GIBCO, Rockville, MD) containing FBS (10% vol/vol), L-glutamine (4 mM), and penicillin (100 µg/ml)-streptomycin (100 IU/ml). Before transfection (1 day), cells were transferred to six-well plates and incubated with the same medium without antibiotics. Next, the cells were transfected with a human HIF-1
expression vector construct; the HIF-1
expression vector contained inactivated prolyl and asparagyl hydroxylation sites generated by site-directed mutagenesis (37). Control cells were transfected with random DNA. Transfection was performed using Lipofetamine 2000 (Invitrogen, Carlsbad, CA) at a cell density of 75% confluence. After transfection (8 h), the medium was aspirated and replaced with medium containing serum and antibiotics, and the cells were incubated for another 24, 36, or 56 h. Next, the cells were rinsed two times with cold PBS and lysed with radioimmunoprecipitation assay (RIPA) buffer [50 mmol/l Tris·HCl at pH 7.4, 150 mmol/l NaCl, 1 mmol/l EDTA, 1% Triton X-100, 0.5% (wt/vol) deoxycholic acid, and 0.1% SDS] supplemented with the protease inhibitor cocktail (1 tablet/10 ml; Roche Diagnostics, Indianapolis, IN) on ice. The cell lysates were incubated at 4°C with a continuous rocking motion for 30 min and centrifuged (16,000 g) for 20 min. The supernatant was collected for immunoblot (see below).
Immunoblot.
Lung tissue (
60 mg wet wt) was minced on ice and transferred to tubes containing RIPA buffer (see above). Tissue fragments were homogenized by Polytron followed by an ultrasonic device. The homogenates were incubated at 4°C for 30 min and cleared by centrifugation (16,000 g for 20 min). The supernatant was transferred to another tube for immunoblot.
Total protein concentration was measured by the Bradford method; aliquots (
150 µg from tissue homogenate and 40 µg from cell lysate) were resolved on 7.5% SDS-PAGE, transferred to polyvinylidene difluoride membranes, blocked in Blotto-Tween solution (5% nonfat dry milk, 0.05% Tween in PBS) for 1 h, and then incubated in Blotto-Tween with the primary antibody for 2 h. The primary antisera were rabbit anti-human HIF-1
polyclonal antibody (0.4 µg/ml, H-206; Santa Cruz Biotechnology, Santa Cruz, CA) or rabbit anti-mouse EPO-R polyclonal antibody (1 µg/ml, C20; Santa Cruz). Labeled protein was visualized by chemiluminescence (ECL-plus; Amersham) and quantified by densitometry. For loading control, the membranes were stripped and re-probed with mouse anti-
-actin monoclonal antibody (1 µg/ml, A1978; Sigma, St. Louis, MO). Specificity of the anti-HIF-1
antibody was examined by incubating a duplicate blot with 5X excess blocking peptide (sc-8711P; Santa Cruz).
For studies of dog lung, three assays were performed, each using a separate tissue sample from each animal. The HIF-1
signal intensity was normalized to that of
-actin in corresponding samples and expressed as a ratio to the mean signal intensity of the respective control group (mature or sham) obtained on the same blot. Replicate results in a given animal were averaged and compared between groups (PNX vs. sham or immature vs. mature) by unpaired t-test.
For studies on HEK-293 cells, the HIF-1
and EPO-R protein levels in cells transfected with the human HIF-1
expression vector were compared with control cells transfected with random DNA in the same blot prepared at different time points (24, 36, and 56 h) posttransfection. The target signal intensity was normalized to that of
-actin. The entire experiment was repeated three times. Results from treatment and control groups were compared by paired t-test.
| RESULTS |
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subunit mRNA in normal dog lung.
For RNA blot, we used dog-specific, sequence-verified cDNA probes cloned from different regions of each HIF-
subunit (Fig. 1). Unique transcripts were obtained for HIF-1
(
4.5 kb) and HIF-2
(
4.7 kb). Three bands were labeled with the HIF-3
probe (
1.4, 1.6, and 3.2 kb) but were too faint for accurate quantification. Normalized with respect to cyclophilin A, mRNA abundance in normal dog lungs was greatest for HIF-2
followed by HIF-1
and HIF-3
.
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subunit mRNA during postnatal lung growth.
By RNA blot, HIF-1
was significantly (52%) higher in the actively growing lungs of 2- to 3-mo-old animals than in the lungs of 12-mo-old mature animals (P = 0.003; Fig. 2A). By comparison, HIF-2
was similar between the two age groups (P = 0.189; Fig. 3A). Real-time RT-PCR corroborated these findings: HIF-1
was 95% higher in the actively growing lungs compared with the mature lungs (P = 0.0007; Fig. 4A), whereas HIF-2
was not different between groups (P = 0.447; Fig. 4B). By real-time RT-PCR, HIF-3
was 65% lower in actively growing lungs than in mature lungs (P = 0.0001; Fig. 4C).
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subunit mRNA during compensatory lung growth.
By RNA blot, HIF-1
mRNA levels were 41% higher 3 wk after right PNX than in corresponding sham lungs (P = 0.04) and
33% higher than in normal lung tissue removed at the time of PNX, but the latter difference did not reach statistical significance (P = 0.10; Fig. 2B). On the other hand, post-PNX HIF-2
mRNA was 41% lower than that in sham lungs (P = 0.02) and 15% lower than in pre-PNX normal lungs (P = 0.04; Fig. 3B).
By real-time RT-PCR at 3 wk post-PNX, HIF-1
mRNA levels were 284% higher than in corresponding sham lungs (P = 0.001) and 272% higher than in pre-PNX normal lungs (P = 0.001; Fig. 5A). The HIF-2
transcript was 42% lower than that in sham lungs (P = 0.006) and 30% lower than that in pre-PNX normal lungs (P = 0.04; Fig. 5C). The HIF-3
transcript was 53% lower than that in sham lungs (P = 0.003) and 97% lower than that of pre-PNX normal lungs (P = 0.001; Fig. 5E). By 10 mo after surgery, the levels of HIF-1
(Fig. 4B), HIF-2
(Fig. 4B), and HIF-3
(Fig. 4F) transcript were no longer different from that in corresponding sham lungs (P > 0.05).
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subunit mRNA in kidney and liver after PNX.
By real-time RT-PCR, the mRNA levels of HIF-1
(Fig. 6A), -2
(Fig. 6B), and -3
(Fig. 6C) in the kidney and liver did not differ between animals studied 3 wk post-PNX and corresponding sham controls (P > 0.05). Thus the changes in mRNA expression of HIF-
subunits in response to PNX were specific to the lung.
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protein during lung growth.
In the normal dog lung, we detected a major band of HIF-1
protein,
70 kDa, that was specifically blocked by a blocking peptide (Fig. 7A). In the immature lung, the HIF-1
protein level was 120% higher than in the mature lung (P = 0.0001; Fig. 7B). In the remaining lung, 3 wk post-PNX HIF-1
protein was 196% higher than in the control lung from sham animals (P = 0.001; Fig. 7C).
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overexpression on EPO-R production.
In cultured HEK-239 cells, we observed enhanced expression of HIF-1
protein 24, 36, and 56 h after transfection with the HIF-1
expression construct compared with control cells transfected with random DNA (Fig. 8); differences were statistically significant at 36 h (5.4-fold, P = 0.01) and 56 h (5.0-fold, P = 0.02). Concurrently, EPO-R protein level was also elevated in HIF-1
-transfected cells at 36 and 56 h (1.9- and 1.4-fold, respectively, P < 0.05; Fig. 8).
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| DISCUSSION |
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subunits during these two types of lung growth. The mRNA of HIF-1
was 95% higher in actively growing lungs than in mature lungs and further increased by 284% during compensatory growth 3 wk after right PNX when cell proliferation in the remaining lung was markedly activated (10). HIF-2
mRNA was not altered during postnatal lung growth and was 42% lower 3 wk post-PNX compared with sham controls. HIF-3
mRNA was 65% lower in postnatal growing lungs than in mature lungs and further reduced (by 53%) 3 wk post-PNX. By 10 mo after PNX, the mRNA of all HIF-
subunits had completely returned to control levels corresponding to normalized growth markers in the remaining lung (10). The differential response of various HIF-
subunits to PNX was specific to the lung; no effect was observed in the kidney or liver. Consistent with the elevated transcripts, HIF-1
protein was also elevated in normal growing lungs, and the elevation was further accentuated during compensatory lung growth. In addition, in vitro overexpression of HIF-1
enhanced endogenous EPO-R production in cultured HEK-293 cells, supporting a direct link between HIF-1
activation and EPO-R production. We conclude that the differential regulated expression of HIF subunits could modulate in vivo expression of EPO-R during normal and compensatory lung growth.
HIF-1
expression.
Mammalian bHLH-PAS proteins such as HIF-1
show considerable homology to Trachealess, the protein that regulates tracheal development in Drosophila (21, 38). The HIF-1
subunit is responsive not only to a low oxygen tension but also to androgens (27), epidermal growth factor (40), insulin and interleukin-1 (34), and mechanical strain (6, 24). The downstream target genes of HIF-1
are involved in erythropoiesis, cell proliferation and survival, anti-apoptosis, angiogenesis, vascular remodeling, and vascular tone (1, 5, 12). Blocking HIF-1
protein synthesis markedly downregulates gene expression of heme oxygenase-I, phosphoglycerate kinase, and VEGF (13) that subserve a wide range of metabolic functions. A high level of HIF-1
is present in aggressively proliferating tumor cells in association with neoangiogenesis (25). Interference of HIF-1
mRNA synthesis retards lung cell proliferation in vitro (13). Targeted disruption of HIF-1
(22) is embryonically lethal, associated with widespread vascularization defects. In light of its diverse action, it is not surprising that HIF-1
is involved in postnatal organ growth and development, even though this aspect has not been investigated extensively.
Although severe ambient hypoxia (1% O2) suppresses markers of cell differentiation in human fetal lung explants (2), a more modest level (3% O2) enhances epithelial branching morphogenesis in cultured fetal mouse lung (35). Chronic alveolar hypoxia stimulates postnatal lung development in dogs (23) and guinea pigs (19) as well as compensatory lung growth in post-PNX rats (32). In post-PNX dogs, alveolar-arterial oxygen tension gradient is normal at rest but becomes abnormally elevated upon exercise (18). One might expect the intermittent and modest alveolar hypoxia after PNX to increase HIF-1
expression, leading to enhanced vascularization. However, organ hypoxia/ischemia typically stabilizes HIF-1
protein without increasing HIF-1
mRNA expression (31). Our finding of more abundant HIF-1
mRNA and protein reflects the contribution of transcriptional induction of HIF-1
in the growing lung. Because the maturing postnatal lung is not overtly hypoxic, elevated HIF-1
steady-state transcript levels in these lungs suggest the contribution of other signal(s) to HIF-1
activation, possibly including persistent mechanical lung strain imposed by the enlarging rib cage as well as hormones and growth factors associated with lung development.
HIF-2
expression.
Although HIF-1
shows marked changes in oxygen-dependent protein degradation in cultured cells, HIF-2
is less dynamically regulated by hypoxia (30). In developing lungs, HIF-2
gene expression is temporally and spatially associated with that of hypoxia-induced mitogenic factor, a potent hypoxia-induced cytokine involved in pulmonary vasoconstriction, proliferation, and angiogenesis (36). During fetal lung maturation, HIF-2
may also regulate VEGF synthesis or the activity of VEGF receptor-2 (8). The expression of HIF-2
correlates with that of VEGF and VEGF receptors (VEGFR-1 and -2) in newborn rat lungs during normal development or hyperoxic injury (17). Although chronic upregulation of HIF-1
leads to active vascular remodeling and increased pulmonary arterial pressure (26), downregulation of HIF-2
ameliorates the pulmonary hypertension and right ventricular hypertrophy induced by chronic hypoxia (4). Mice with heterozygous deficiency of HIF-2
show reduced pulmonary levels of endothelin-1 and plasma catecholamine compared with wild-type mice. In our study, HIF-2
mRNA was reduced significantly after PNX but not during postnatal growth; the reduction may mitigate the post-PNX increase in pulmonary vascular resistance and the associated vascular remodeling.
HIF-3
expression.
The level of HIF-3
mRNA increases with the duration of moderate hypoxia (15). The limited available literature suggests that HIF-3
and its splice variants oppose or inhibit the action of HIF-1
(14, 28, 29). Because of its lack of NH2-terminal and/or COOH-terminal transactivation domain, HIF-3
and its splice variants may compete with HIF-1
for association with the
-subunit, thus forming an abortive complex that is unable to bind to the HIF-responsive element of target genes (14) or directly interact with HIF-1
(28). In our study, HIF-3
gene expression changed in the opposite direction from that of HIF-1
during lung growth, consistent with an inhibitory interaction between HIF-1
and -3
.
Comparison of developmental and compensatory lung growth.
In the growing remaining lung after PNX, vigorous cellular proliferation and tissue growth are marked by further increased expression of proliferating cell nuclear antigen above the already elevated level observed in age-matched growing animals relative to adult animals (11). In these post-PNX animals, we showed that changes in expression of epidermal growth factor, its receptor, and surfactant proteins-A and -D during compensatory lung growth diverged from that during developmental lung growth (11). Subsequently, we reported that EPO-R protein is higher (by
60%) in the actively growing postnatal dog lung and the increase is further accentuated (by another 60%) during post-PNX compensatory growth (10). Although all soluble fractions of EPO-R increased during postnatal lung growth, only one of three soluble fractions increased during post-PNX lung growth, suggesting different EPO-R processing during different types of lung growth. In the present study, the higher HIF-1
and lower HIF-3
mRNA levels in normal growing lungs were further accentuated after PNX. However, HIF-2
mRNA level was unchanged in the normal growing lung but significantly lower in the post-PNX lung, suggesting differences in signaling among HIF subunits during different types of lung growth. Thus, in multiple biochemical pathways that have been examined so far, the post-PNX response reproduces some but not all aspects of the developmental response, indicating differential involvement of distinct mediators or regulatory pathways during different types of lung growth.
In summary, these results implicate the HIF system as a potential regulator of lung growth. Postnatal lung growth is associated with elevated HIF-1
and decreased HIF-3
mRNA levels; the lower HIF-3
mRNA probably reflects suppression of a negative regulator to permit full upregulation of HIF-1
activity. Post-PNX compensation is associated with a further increase in HIF-1
mRNA and reductions in HIF-2
and -3
mRNA in the remaining lung. A selective lowering of HIF-2
after PNX but not during normal maturation may ameliorate the post-PNX increase in pulmonary vascular resistance and the associated pulmonary vascular remodeling. The protein expression of HIF-1
paralleled that of its mRNA expression, consistent with activated HIF-1
production during lung growth. In addition, in vitro overexpression of HIF-1
enhanced endogenous EPO-R production in cell culture, supporting a link between HIF-1
activation and EPO-R expression. We conclude that the previously observed EPO-R upregulation in the growing lung (10) is associated with activation of an upstream transcription regulator, HIF-1
, whereas other HIF subunits (2
and 3
) also modulate the response.
| GRANTS |
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| ACKNOWLEDGMENTS |
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| FOOTNOTES |
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The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
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